Action(const ActionOptions &) | PLMD::Action | explicit |
Action(const Action &a)=delete | PLMD::Action | private |
ActionPilot(const ActionOptions &) | PLMD::ActionPilot | explicit |
activate() | PLMD::Action | virtual |
active | PLMD::Action | private |
addDependency(Action *) | PLMD::Action | |
after | PLMD::Action | private |
apply() override | PLMD::gridtools::GridPrintingBase | inlinevirtual |
beforeUpdate() | PLMD::Action | inlinevirtual |
calculate() override | PLMD::gridtools::GridPrintingBase | inlinevirtual |
calculateFromPDB(const PDB &) | PLMD::Action | |
calculateNumericalDerivatives(ActionWithValue *a=NULL) | PLMD::Action | virtual |
checkNeedsGradients() const | PLMD::Action | inlinevirtual |
checkNumericalDerivatives() const | PLMD::Action | inlinevirtual |
checkRead() | PLMD::Action | |
checkUpdate() const | PLMD::Action | |
cite(const std::string &s) | PLMD::Action | |
clearDependencies() | PLMD::Action | |
clearOptions() | PLMD::Action | virtual |
comm | PLMD::Action | |
deactivate() | PLMD::Action | inlinevirtual |
Dependencies typedef | PLMD::Action | |
doCheckPoint | PLMD::Action | private |
DumpGrid(const ActionOptions &ao) | PLMD::gridtools::DumpGrid | explicit |
error(const std::string &msg) const | PLMD::Action | |
exit(int c=0) | PLMD::Action | |
fclose(FILE *fp) | PLMD::Action | |
fflush() | PLMD::Action | |
filename | PLMD::gridtools::GridPrintingBase | protected |
files | PLMD::Action | |
fmt | PLMD::gridtools::GridPrintingBase | protected |
fopen(const char *path, const char *mode) | PLMD::Action | |
getCPT() const | PLMD::Action | |
getDependencies() const | PLMD::Action | inline |
getDocumentation() const | PLMD::Action | virtual |
getExchangeStep() const | PLMD::Action | |
getKeyword(const std::string &key) | PLMD::Action | |
getLabel() const | PLMD::Action | inline |
getName() const | PLMD::Action | inline |
getRestart() const | PLMD::Action | inline |
getStep() const | PLMD::Action | |
getStride() const | PLMD::ActionPilot | |
getTime() const | PLMD::Action | |
getTimeStep() const | PLMD::Action | |
GridPrintingBase(const ActionOptions &ao) | PLMD::gridtools::GridPrintingBase | explicit |
ingrid | PLMD::gridtools::GridPrintingBase | protected |
isActive() const | PLMD::Action | inline |
isOptionOn(const std::string &s) const | PLMD::Action | inline |
keywords | PLMD::Action | |
label | PLMD::Action | private |
line | PLMD::Action | private |
lockRequests() | PLMD::Action | inlinevirtual |
log | PLMD::Action | |
multi_sim_comm | PLMD::Action | |
name | PLMD::Action | private |
onStep() const | PLMD::ActionPilot | virtual |
operator=(const Action &a)=delete | PLMD::Action | private |
options | PLMD::Action | private |
output_for_all_replicas | PLMD::gridtools::GridPrintingBase | protected |
parse(const std::string &key, T &t) | PLMD::Action | |
parseFlag(const std::string &key, bool &t) | PLMD::Action | |
parseNumbered(const std::string &key, const int no, T &t) | PLMD::Action | |
parseNumberedVector(const std::string &key, const int no, std::vector< T > &t) | PLMD::Action | |
parseVector(const std::string &key, std::vector< T > &t) | PLMD::Action | |
plumed | PLMD::Action | |
prepare() | PLMD::Action | virtual |
preps | PLMD::gridtools::GridPrintingBase | protected |
printGrid(OFile &ofile) const override | PLMD::gridtools::DumpGrid | virtual |
readAtomsFromPDB(const PDB &) | PLMD::Action | inlinevirtual |
registerKeywords(Keywords &keys) | PLMD::gridtools::DumpGrid | static |
replica_index | PLMD::Action | private |
restart | PLMD::Action | private |
runFinalJobs() override | PLMD::gridtools::GridPrintingBase | virtual |
setOption(const std::string &s) | PLMD::Action | virtual |
setStride(const int &n) | PLMD::ActionPilot | |
stride | PLMD::ActionPilot | private |
unlockRequests() | PLMD::Action | inlinevirtual |
update() override | PLMD::gridtools::GridPrintingBase | virtual |
update_from | PLMD::Action | private |
update_until | PLMD::Action | private |
warning(const std::string &msg) | PLMD::Action | |
~Action() | PLMD::Action | virtual |