- w -
- w0_
: PLMD::isdb::Rescale
- walker_rank_
: PLMD::opes::OPESexpanded
, PLMD::opes::OPESmetad< mode >
- walkers_mpi_
: PLMD::bias::MetaD
, PLMD::bias::PBMetaD
- wascleared
: PLMD::vesselbase::AveragingVessel
- wasforced
: PLMD::gridtools::GridVessel
- watch
: PLMD::Stopwatch::Handler
- watches
: PLMD::Stopwatch
- wave
: PLMD::molfile::molfile_qm_timestep_t
- wave_coeffs
: PLMD::molfile::molfile_qm_wavefunction_t
- wavef_size
: PLMD::molfile::molfile_qm_metadata_t
, PLMD::molfile::molfile_qm_timestep_metadata
- waveletGrid_
: PLMD::ves::BF_Wavelets
- wavenumbers
: PLMD::molfile::molfile_qm_hessian_t
- weight
: PLMD::colvar::ContactMap
, PLMD::logmfd::LogMFD
- weight_mass
: PLMD::vatom::Center
- weight_vals
: PLMD::analysis::ReadAnalysisFrames
- weightHasDerivatives
: PLMD::vesselbase::ActionWithVessel
- weights
: PLMD::analysis::ReadAnalysisFrames
, PLMD::analysis::ReadDissimilarityMatrix
, PLMD::dimred::SketchMapRead
, PLMD::function::annfunc::ANN
, PLMD::generic::FitToTemplate
, PLMD::gridtools::ActionWithGrid
, PLMD::mapping::Mapping
, PLMD::MultiDomainRMSD
, PLMD::ReferenceArguments
, PLMD::vatom::Center
, PLMD::vesselbase::ActionWithAveraging
- weights_
: PLMD::ves::TD_ExponentiallyModifiedGaussian
, PLMD::ves::TD_Gaussian
, PLMD::ves::TD_GeneralizedNormal
, PLMD::ves::TD_LinearCombination
, PLMD::ves::TD_VonMises
- weights_calculated
: PLMD::analysis::ReadAnalysisFrames
- weightsCalculated
: PLMD::bias::ReweightWham
- welltemp_
: PLMD::bias::MetaD
, PLMD::bias::PBMetaD
- wfile
: PLMD::analysis::ReadDissimilarityMatrix
- wgridstride_
: PLMD::bias::MetaD
, PLMD::bias::PBMetaD
- wham_pointer
: PLMD::analysis::ReadAnalysisFrames
- what
: PLMD::Plumed::NothrowHandler
, plumed_error
- what_buffer
: plumed_error
- which_cluster
: PLMD::adjmat::ClusteringBase
, PLMD::adjmat::OutputCluster
- width
: PLMD::drr::UIestimator::n_matrix
, PLMD::drr::UIestimator::n_vector< T >
, PLMD::drr::UIestimator::UIestimator
, PLMD::HistogramBead
, PLMD::KernelFunctions
- work
: PLMD::bias::MaxEnt
, PLMD::bias::MovingRestraint
, PLMD::logmfd::LogMFD
, PLMD::PlumedMain
- work_
: PLMD::bias::MetaD
, PLMD::opes::OPESexpanded
, PLMD::opes::OPESmetad< mode >
, PLMD::ves::VesDeltaF
- workspace
: PLMD::lepton::CompiledExpression
- write_angles
: PLMD::molfile::molfile_plugin_t
- write_bonds
: PLMD::molfile::molfile_plugin_t
- write_positions_first
: PLMD::cltools::SimpleMD
- write_statistics_first
: PLMD::cltools::SimpleMD
- write_statistics_fp
: PLMD::cltools::SimpleMD
- write_statistics_last_time_reopened
: PLMD::cltools::SimpleMD
- write_stride_
: PLMD::isdb::Metainference
, PLMD::isdb::MetainferenceBase
- write_structure
: PLMD::molfile::molfile_plugin_t
- write_timestep
: PLMD::molfile::molfile_plugin_t
- write_volumetric_data
: PLMD::molfile::molfile_plugin_t
- write_volumetric_data_ex
: PLMD::molfile::molfile_plugin_t
- written
: PLMD::drr::UIestimator::UIestimator
- written_1D
: PLMD::drr::UIestimator::UIestimator
- wStateStride_
: PLMD::opes::OPESexpanded
, PLMD::opes::OPESmetad< mode >
- wstride
: PLMD::mapping::AdaptivePath
- wsum
: PLMD::mapping::AdaptivePath
- wsum_
: PLMD::eds::EDS
- ww
: PLMD::analysis::Histogram