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- u -
uniform_integrals_ :
PLMD::ves::BasisFunctions
uniq_index :
PLMD::Atoms
unique :
PLMD::ActionAtomistic
,
PLMD::Atoms
unique_local :
PLMD::ActionAtomistic
units :
PLMD::Atoms
unormalised :
PLMD::vesselbase::AveragingVessel
unormalized :
PLMD::crystallization::CubicHarmonicBase
update_calls_ :
PLMD::eds::EDS
update_from :
PLMD::Action
update_period_ :
PLMD::eds::EDS
update_str :
PLMD::mapping::AdaptivePath
update_until :
PLMD::Action
updateFlags :
PLMD::PlumedMain
updateFreq :
PLMD::multicolvar::BridgedMultiColvarFunction
updatePIV :
PLMD::piv::PIV
upper :
PLMD::DRMSD
,
PLMD::generic::UpdateIf
upperboundary :
PLMD::drr::UIestimator::n_matrix
,
PLMD::drr::UIestimator::n_vector< T >
,
PLMD::drr::UIestimator::UIestimator
upperd :
PLMD::function::Stats
upperlimits :
PLMD::analysis::Committor
uppI_ :
PLMD::bias::MetaD
,
PLMD::bias::PBMetaD
,
PLMD::BiasRepresentation
,
PLMD::function::FuncSumHills
use_beta_ :
PLMD::ves::TD_Custom
use_fes_ :
PLMD::ves::TD_Custom
use_for_central_atom :
PLMD::multicolvar::MultiColvarBase
use_hessian_ :
PLMD::ves::Optimizer
use_kbt_ :
PLMD::ves::TD_Custom
use_masses :
PLMD::colvar::Gyration
use_multiple_coeffssets_ :
PLMD::ves::VesBias
use_mwalkers_mpi_ :
PLMD::ves::Optimizer
use_sf :
PLMD::multicolvar::Angles
,
PLMD::multicolvar::XAngles
,
PLMD::multicolvar::XYTorsion
use_switch :
PLMD::adjmat::ClusterDistribution
useall :
PLMD::colvar::Dimer
usedatoms1 :
PLMD::colvar::Dimer
usedatoms2 :
PLMD::colvar::Dimer
usederiv_ :
PLMD::GridBase
uselinkforthree :
PLMD::multicolvar::MultiColvarBase
usepbc :
PLMD::multicolvar::MultiColvarBase
userActions :
PLMD::vesselbase::StoreDataVessel
useRunAllTasks :
PLMD::vesselbase::ActionWithAveraging
usespecies :
PLMD::multicolvar::MultiColvarBase
usetol :
PLMD::vesselbase::FunctionVessel
ustride_reweightfactor_ :
PLMD::ves::Optimizer
ustride_targetdist_ :
PLMD::ves::Optimizer
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