- u -
- U01()
: PLMD::Random
- U01d()
: PLMD::Random
- uboundDerivative()
: PLMD::HistogramBead
- Units()
: PLMD::setup::Units
, PLMD::Units
- unlockContributors()
: PLMD::vesselbase::ActionWithVessel
- unlockRequests()
: PLMD::Action
, PLMD::ActionAtomistic
, PLMD::ActionWithArguments
, PLMD::analysis::Analysis
, PLMD::mapping::Mapping
, PLMD::mapping::PCAVars
- update()
: PLMD::Action
, PLMD::analysis::Analysis
, PLMD::bias::ExtendedLagrangian
, PLMD::bias::MetaD
, PLMD::bias::PBMetaD
, PLMD::FlexibleBin
, PLMD::generic::DumpAtoms
, PLMD::generic::DumpDerivatives
, PLMD::generic::DumpForces
, PLMD::generic::DumpMassCharge
, PLMD::generic::DumpProjections
, PLMD::generic::EffectiveEnergyDrift
, PLMD::generic::Flush
, PLMD::generic::Print
, PLMD::generic::Read
, PLMD::multicolvar::DumpMultiColvar
, PLMD::multicolvar::MultiColvarDensity
, PLMD::multicolvar::VolumeCavity
, PLMD::multicolvar::VolumeTetrapore
, PLMD::NeighborList
- updateActiveAtoms()
: PLMD::crystallization::DFSClustering
, PLMD::multicolvar::BridgedMultiColvarFunction
, PLMD::multicolvar::MultiColvar
, PLMD::multicolvar::MultiColvarBase
, PLMD::multicolvar::MultiColvarFunction
- updateActiveMembers()
: PLMD::DynamicList< T >
- updateComplete()
: PLMD::DynamicList< T >
, PLMD::MultiValue
, PLMD::ReferenceValuePack
- updateDynamicList()
: PLMD::multicolvar::AtomValuePack
, PLMD::MultiValue
- updateDynamicLists()
: PLMD::ReferenceValuePack
- updateForces()
: PLMD::Atoms
, PLMD::MDAtomsBase
, PLMD::MDAtomsTyped< T >
- updateIndex()
: PLMD::MultiValue
- updateUnits()
: PLMD::Atoms
- updateUsingIndices()
: PLMD::multicolvar::AtomValuePack
- updateVirial()
: PLMD::MDAtomsBase
, PLMD::MDAtomsTyped< T >
- use()
: PLMD::Keywords
- useCustomisableComponents()
: PLMD::ActionWithValue
- useNumericalDerivatives()
: PLMD::ActionWithValue
- usesPbc()
: PLMD::multicolvar::MultiColvarBase
- usingFastOption()
: PLMD::ReferenceConfigurationOptions
- usingLowMem()
: PLMD::vesselbase::ActionWithVessel
, PLMD::vesselbase::StoreDataVessel
- usingMemory()
: PLMD::analysis::Analysis
- usingNaturalUnits()
: PLMD::Atoms
- UWalls()
: PLMD::bias::UWalls
, PLMD::manyrestraints::UWalls