- b -
- B
: PLMD::molfile::md_box
, PLMD::molfile::molfile_timestep_t
- b
: PLMD::SwitchingFunction
- backstring
: PLMD::OFile
- basis
: PLMD::molfile::molfile_qm_basis_t
, PLMD::molfile::molfile_qm_t
- basis_string
: PLMD::molfile::molfile_qm_sysinfo_t
- bead
: PLMD::multicolvar::ActionVolume
- beingread
: PLMD::function::FilesHandler
- beta
: PLMD::BiasWeight
, PLMD::function::FuncSumHills
, PLMD::molfile::md_box
, PLMD::molfile::molfile_timestep_t
, PLMD::PDB
, PLMD::ProbWeight
, PLMD::vesselbase::Max
, PLMD::vesselbase::Min
- bfactor
: PLMD::molfile::molfile_atom_t
- bias
: PLMD::PlumedMain
- biases
: PLMD::analysis::Analysis
- biasf
: PLMD::BiasRepresentation
- biasf_
: PLMD::bias::MetaD
- BiasGrid_
: PLMD::bias::External
, PLMD::bias::MetaD
, PLMD::BiasRepresentation
- biasrep
: PLMD::function::FuncSumHills
- block_ends
: PLMD::PDB
- blocks
: PLMD::MultiDomainRMSD
- bmax
: PLMD::analysis::Committor
- bmin
: PLMD::analysis::Committor
- bold
: PLMD::CInterpolation
- bond_d
: PLMD::RDC
- booldefs
: PLMD::Keywords
- bounds_were_set
: PLMD::DRMSD
- box
: PLMD::Atoms
, PLMD::MDAtomsTyped< T >
, PLMD::molfile::md_ts
, PLMD::Pbc
- box_size
: PLMD::molfile::trx_hdr
- boxDerivatives
: PLMD::ActionWithVirtualAtom
- boxHasBeenSet
: PLMD::Atoms
- bridgeVariable
: PLMD::vesselbase::ActionWithVessel
- buffer
: PLMD::GREX
, PLMD::OFile
, PLMD::vesselbase::ActionWithVessel
- buffer_string
: PLMD::OFile
- buflen
: PLMD::OFile
- bufsize
: PLMD::vesselbase::Vessel
- bufstart
: PLMD::vesselbase::Vessel
- bw
: PLMD::analysis::Histogram