Classes | |
class | ActionVolume |
This is the abstract base class to use for implementing a new way of definining a particular region of the simulation box. More... | |
class | AlphaBeta |
Provides the keyword ALPHABETA More... | |
class | Angles |
Provides the keyword ANGLES More... | |
class | AtomValuePack |
class | Bridge |
Provides the keyword BRIDGE More... | |
class | BridgedMultiColvarFunction |
class | CatomPack |
class | CenterOfMultiColvar |
Provides the keyword CENTER_OF_MULTICOLVAR More... | |
class | CoordinationNumbers |
Provides the keyword COORDINATIONNUMBER More... | |
class | Density |
Provides the keyword DENSITY More... | |
class | DihedralCorrelation |
Provides the keyword DIHCOR More... | |
class | DistanceFromContour |
Provides the keyword DISTANCE_FROM_CONTOUR More... | |
class | Distances |
Provides the keyword DISTANCES More... | |
class | DumpMultiColvar |
Provides the keyword DUMPMULTICOLVAR More... | |
class | FilterBetween |
Provides the keyword MFILTER_BETWEEN More... | |
class | FilterLess |
Provides the keyword MFILTER_LESS More... | |
class | FilterMore |
Provides the keyword MFILTER_MORE More... | |
class | InPlaneDistances |
Provides the keyword INPLANEDISTANCES More... | |
class | LocalAverage |
Provides the keyword LOCAL_AVERAGE More... | |
class | MultiColvar |
This is the abstract base class to use for creating distributions of colvars and functions thereof, whtin it there is information as to how to go implementing these types of actions. More... | |
class | MultiColvarBase |
class | MultiColvarDensity |
Provides the keyword MULTICOLVARDENS More... | |
class | MultiColvarFilter |
This is the abstract base class to use for implementing a new way of filtering collective variable values to see whether or not they are within a certain range More... | |
class | MultiColvarFunction |
class | NumberOfLinks |
Provides the keyword NLINKS More... | |
class | Torsions |
Provides the keyword TORSIONS More... | |
class | VolumeAround |
Provides the keyword AROUND More... | |
class | VolumeCavity |
Provides the keyword CAVITY More... | |
class | VolumeGradientBase |
class | VolumeInCylinder |
Provides the keyword INCYLINDER More... | |
class | VolumeInSphere |
Provides the keyword INSPHERE More... | |
class | VolumeTetrapore |
Provides the keyword TETRAHEDRALPORE More... | |
class | XDistances |
Provides the keyword XDISTANCES More... | |
class | XYDistances |
Provides the keyword XYDISTANCES More... | |
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