This is the complete list of members for PLMD::ReferenceValuePack, including all inherited members.
addArgumentDerivatives(const unsigned &iarg, const double &der) | PLMD::ReferenceValuePack | inline |
addAtomDerivatives(const unsigned &iatom, const Vector &der) | PLMD::ReferenceValuePack | inline |
addBoxDerivatives(const Tensor &vir) | PLMD::ReferenceValuePack | inline |
atom_indices | PLMD::ReferenceValuePack | private |
boxWasSet | PLMD::ReferenceValuePack | private |
calcUsingPCAOption() const | PLMD::ReferenceValuePack | inline |
centeredpos | PLMD::ReferenceValuePack | private |
clear() | PLMD::ReferenceValuePack | |
copyScaledDerivatives(const unsigned &from, const double &scalef, const MultiValue &tvals) | PLMD::ReferenceValuePack | |
displacement | PLMD::ReferenceValuePack | private |
DRotDPos | PLMD::ReferenceValuePack | private |
getArgumentDerivative(const unsigned &ival) const | PLMD::ReferenceValuePack | inline |
getAtomDerivative(const unsigned &iatom) const | PLMD::ReferenceValuePack | inline |
getAtomIndex(const unsigned &iatom) const | PLMD::ReferenceValuePack | inline |
getAtomsDisplacementVector() | PLMD::ReferenceValuePack | inline |
getAtomVector() | PLMD::ReferenceValuePack | inline |
getBoxDerivatives() const | PLMD::ReferenceValuePack | inline |
getNumberOfArguments() const | PLMD::ReferenceValuePack | inline |
getNumberOfAtoms() const | PLMD::ReferenceValuePack | inline |
getNumberOfDerivatives() const | PLMD::ReferenceValuePack | inline |
moveDerivatives(const unsigned &from, const unsigned &to) | PLMD::ReferenceValuePack | |
MultiDomainRMSD class | PLMD::ReferenceValuePack | friend |
myvals | PLMD::ReferenceValuePack | private |
numberOfArgs | PLMD::ReferenceValuePack | private |
oind | PLMD::ReferenceValuePack | private |
oind_set | PLMD::ReferenceValuePack | private |
OptimalRMSD class | PLMD::ReferenceValuePack | friend |
pca | PLMD::ReferenceValuePack | private |
ReferenceValuePack(const unsigned &nargs, const unsigned &natoms, MultiValue &vals) | PLMD::ReferenceValuePack | |
resize(const unsigned &nargs, const unsigned &natoms) | PLMD::ReferenceValuePack | |
rot | PLMD::ReferenceValuePack | private |
scaleAllDerivatives(const double &scalef) | PLMD::ReferenceValuePack | |
setArgumentDerivatives(const unsigned &iarg, const double &der) | PLMD::ReferenceValuePack | inline |
setAtomDerivatives(const unsigned &jder, const Vector &der) | PLMD::ReferenceValuePack | inline |
setAtomIndex(const unsigned &iatom, const unsigned &jindex) | PLMD::ReferenceValuePack | inline |
setValIndex(const unsigned &ind) | PLMD::ReferenceValuePack | inline |
switchOnPCAOption() | PLMD::ReferenceValuePack | inline |
updateComplete() const | PLMD::ReferenceValuePack | inline |
updateDynamicLists() | PLMD::ReferenceValuePack | |
virialWasSet() const | PLMD::ReferenceValuePack | inline |