CLTool(const CLToolOptions &co) | PLMD::CLTool | explicit |
commandline enum value | PLMD::CLTool | |
description() const | PLMD::cltools::ShowGraph | inlinevirtual |
drawActionWithVectorNode(OFile &ofile, PlumedMain &p, Action *ag, const std::vector< std::string > &mychain, std::vector< bool > &printed) | PLMD::cltools::ShowGraph | |
error(const std::string &msg) | PLMD::CLTool | protected |
getInputData() | PLMD::CLTool | inline |
getLabel(const Action *a, const bool &=false) | PLMD::cltools::ShowGraph | |
getLabel(const std::string &s, const bool &=false) | PLMD::cltools::ShowGraph | |
ifile enum value | PLMD::CLTool | |
inputData | PLMD::CLTool | private |
inputdata | PLMD::CLTool | |
keywords | PLMD::CLTool | private |
main(FILE *in, FILE *out, Communicator &pc) | PLMD::cltools::ShowGraph | virtual |
name | PLMD::CLTool | private |
parse(const std::string &key, T &t) | PLMD::CLTool | protected |
parseFlag(const std::string &key, bool &t) | PLMD::CLTool | protected |
parseVector(const std::string &key, std::vector< T > &t) | PLMD::CLTool | protected |
printArgumentConnections(const ActionWithArguments *a, unsigned &linkcount, const bool &force, OFile &ofile) | PLMD::cltools::ShowGraph | |
printAtomConnections(const ActionAtomistic *a, unsigned &linkcount, const bool &force, OFile &ofile) | PLMD::cltools::ShowGraph | |
printStyle(const unsigned &linkcount, const Value *v, OFile &ofile) | PLMD::cltools::ShowGraph | |
readCommandLineArgs(int argc, char **argv, FILE *out) | PLMD::CLTool | private |
readInput(int argc, char **argv, FILE *in, FILE *out) | PLMD::CLTool | |
readInputFile(int argc, char **argv, FILE *in, FILE *out) | PLMD::CLTool | private |
registerKeywords(Keywords &keys) | PLMD::cltools::ShowGraph | static |
setInputData(const std::map< std::string, std::string > &inputData) | PLMD::CLTool | inline |
setRemainingToDefault(FILE *out) | PLMD::CLTool | private |
ShowGraph(const CLToolOptions &co) | PLMD::cltools::ShowGraph | explicit |
unset enum value | PLMD::CLTool | |
~CLTool() | PLMD::CLTool | inlinevirtual |