PLMD::ActionWithArguments Member List

This is the complete list of members for PLMD::ActionWithArguments, including all inherited members.

Action(const ActionOptions &)	PLMD::Action	explicit
Action(const Action &a)=delete	PLMD::Action	private
ActionWithArguments(const ActionOptions &)	PLMD::ActionWithArguments	explicit
activate()	PLMD::Action	virtual
active	PLMD::Action	private
addDependency(Action *)	PLMD::Action
addForcesOnArguments(const unsigned &argstart, const std::vector< double > &forces, unsigned &ind, const std::string &c)	PLMD::ActionWithArguments
after	PLMD::Action	private
apply()=0	PLMD::Action	pure virtual
arguments	PLMD::ActionWithArguments	private
beforeUpdate()	PLMD::Action	inlinevirtual
bringBackInPbc(int i, double d1) const	PLMD::ActionWithArguments	inline
calculate()=0	PLMD::Action	pure virtual
calculateConstantValues(const bool &have_atoms)	PLMD::ActionWithArguments	virtual
calculateFromPDB(const PDB &)	PLMD::Action
calculateNumericalDerivatives(ActionWithValue *a=NULL) override	PLMD::ActionWithArguments	virtual
castToActionAtomistic() noexcept	PLMD::Action	inlinevirtual
castToActionForInterface() noexcept	PLMD::Action	inlinevirtual
castToActionShortcut() noexcept	PLMD::Action	inlinevirtual
castToActionToGetData() noexcept	PLMD::Action	inlinevirtual
castToActionToPutData() noexcept	PLMD::Action	inlinevirtual
castToActionWithArguments() noexcept final	PLMD::ActionWithArguments	inlinevirtual
castToActionWithValue() noexcept	PLMD::Action	inlinevirtual
castToActionWithVirtualAtom() noexcept	PLMD::Action	inlinevirtual
castToDomainDecomposition() noexcept	PLMD::Action	inlinevirtual
castToPbcAction() noexcept	PLMD::Action	inlinevirtual
checkForDependency(Action *)	PLMD::Action
checkNeedsGradients() const	PLMD::Action	inlinevirtual
checkNumericalDerivatives() const	PLMD::Action	inlinevirtual
checkRead()	PLMD::Action
checkUpdate() const	PLMD::Action
cite(const std::string &s)	PLMD::Action
clearDependencies()	PLMD::Action
clearOptions()	PLMD::Action	virtual
comm	PLMD::Action
deactivate()	PLMD::Action	inlinevirtual
defaults	PLMD::Action	private
Dependencies typedef	PLMD::Action
difference(int, double, double) const	PLMD::ActionWithArguments	inline
doCheckPoint	PLMD::Action	private
error(const std::string &msg) const	PLMD::Action
exit(int c=0)	PLMD::Action
expandArgKeywordInPDB(const PDB &pdb)	PLMD::ActionWithArguments	protected
fclose(FILE *fp)	PLMD::Action
fflush()	PLMD::Action
files	PLMD::Action
fopen(const char *path, const char *mode)	PLMD::Action
getArgument(const unsigned n) const	PLMD::ActionWithArguments	inline
getArguments() const	PLMD::ActionWithArguments	inlinevirtual
getCPT() const	PLMD::Action
getDefaultString() const	PLMD::Action	inline
getDependencies() const	PLMD::Action	inline
getExchangeStep() const	PLMD::Action
getKBoltzmann() const	PLMD::Action	protected
getkBT()	PLMD::Action
getKeyword(const std::string &key)	PLMD::Action
getLabel() const	PLMD::Action	inline
getName() const	PLMD::Action	inline
getNumberOfArguments() const	PLMD::ActionWithArguments	inlinevirtual
getPntrToArgument(const unsigned n) const	PLMD::ActionWithArguments	inline
getProjection(unsigned i, unsigned j) const	PLMD::ActionWithArguments
getRestart() const	PLMD::Action	inline
getStep() const	PLMD::Action
getTime() const	PLMD::Action
getTimeStep() const	PLMD::Action
getUnits() const	PLMD::Action	protected
interpretArgumentList(const std::vector< std::string > &c, const ActionSet &as, Action *action, std::vector< Value * > &arg)	PLMD::ActionWithArguments	static
isActive() const	PLMD::Action	inline
isOptionOn(const std::string &s) const	PLMD::Action	inline
keywords	PLMD::Action
label	PLMD::Action	private
line	PLMD::Action	private
lockRequestArguments	PLMD::ActionWithArguments	private
lockRequests() override	PLMD::ActionWithArguments	inlinevirtual
log	PLMD::Action
multi_sim_comm	PLMD::Action
name	PLMD::Action	private
never_activate	PLMD::Action	private
operator=(const Action &a)=delete	PLMD::Action	private
options	PLMD::Action	private
parse(const std::string &key, T &t)	PLMD::Action
parseArgumentList(const std::string &key, std::vector< Value * > &args)	PLMD::ActionWithArguments
parseArgumentList(const std::string &key, int i, std::vector< Value * > &args)	PLMD::ActionWithArguments
parseFlag(const std::string &key, bool &t)	PLMD::Action
parseNumbered(const std::string &key, const int no, T &t)	PLMD::Action
parseNumberedVector(const std::string &key, const int no, std::vector< T > &t)	PLMD::Action
parseVector(const std::string &key, std::vector< T > &t)	PLMD::Action
plumed	PLMD::Action
prepare()	PLMD::Action	virtual
readAtomsFromPDB(const PDB &)	PLMD::Action	inlinevirtual
registerKeywords(Keywords &keys)	PLMD::ActionWithArguments	static
replica_index	PLMD::Action	private
requestArguments(const std::vector< Value * > &arg)	PLMD::ActionWithArguments
requestExtraDependencies(const std::vector< Value * > &extra)	PLMD::ActionWithArguments
resetStoredTimestep()	PLMD::Action
restart	PLMD::Action	private
runFinalJobs()	PLMD::Action	inlinevirtual
setGradients(Value *myval, unsigned &start) const	PLMD::ActionWithArguments
setOption(const std::string &s)	PLMD::Action	virtual
setupConstantValues(const bool &have_atoms)	PLMD::Action
timestep	PLMD::Action	private
unlockRequests() override	PLMD::ActionWithArguments	inlinevirtual
update()	PLMD::Action	inlinevirtual
update_from	PLMD::Action	private
update_until	PLMD::Action	private
usingNaturalUnits() const	PLMD::Action	protected
warning(const std::string &msg)	PLMD::Action
writeInGraph() const	PLMD::Action	virtual
~Action()	PLMD::Action	virtual
~ActionWithArguments()	PLMD::ActionWithArguments	inlinevirtual