PLMD
ActionPilot
PLMD::ActionPilot Member List
This is the complete list of members for
PLMD::ActionPilot
, including all inherited members.
Action
(const ActionOptions &)
PLMD::Action
explicit
Action
(const Action &a)=delete
PLMD::Action
private
ActionPilot
(const ActionOptions &)
PLMD::ActionPilot
explicit
activate
()
PLMD::Action
virtual
active
PLMD::Action
private
addDependency
(Action *)
PLMD::Action
after
PLMD::Action
private
apply
()=0
PLMD::Action
pure virtual
beforeUpdate
()
PLMD::Action
inline
virtual
calculate
()=0
PLMD::Action
pure virtual
calculateFromPDB
(const PDB &)
PLMD::Action
calculateNumericalDerivatives
(ActionWithValue *a=NULL)
PLMD::Action
virtual
castToActionAtomistic
() noexcept
PLMD::Action
inline
virtual
castToActionForInterface
() noexcept
PLMD::Action
inline
virtual
castToActionShortcut
() noexcept
PLMD::Action
inline
virtual
castToActionToGetData
() noexcept
PLMD::Action
inline
virtual
castToActionToPutData
() noexcept
PLMD::Action
inline
virtual
castToActionWithArguments
() noexcept
PLMD::Action
inline
virtual
castToActionWithValue
() noexcept
PLMD::Action
inline
virtual
castToActionWithVirtualAtom
() noexcept
PLMD::Action
inline
virtual
castToDomainDecomposition
() noexcept
PLMD::Action
inline
virtual
castToPbcAction
() noexcept
PLMD::Action
inline
virtual
checkForDependency
(Action *)
PLMD::Action
checkNeedsGradients
() const
PLMD::Action
inline
virtual
checkNumericalDerivatives
() const
PLMD::Action
inline
virtual
checkRead
()
PLMD::Action
checkUpdate
() const
PLMD::Action
cite
(const std::string &s)
PLMD::Action
clearDependencies
()
PLMD::Action
clearOptions
()
PLMD::Action
virtual
comm
PLMD::Action
deactivate
()
PLMD::Action
inline
virtual
defaults
PLMD::Action
private
Dependencies
typedef
PLMD::Action
doCheckPoint
PLMD::Action
private
error
(const std::string &msg) const
PLMD::Action
exit
(int c=0)
PLMD::Action
fclose
(FILE *fp)
PLMD::Action
fflush
()
PLMD::Action
files
PLMD::Action
fopen
(const char *path, const char *mode)
PLMD::Action
getCPT
() const
PLMD::Action
getDefaultString
() const
PLMD::Action
inline
getDependencies
() const
PLMD::Action
inline
getExchangeStep
() const
PLMD::Action
getKBoltzmann
() const
PLMD::Action
protected
getkBT
()
PLMD::Action
getKeyword
(const std::string &key)
PLMD::Action
getLabel
() const
PLMD::Action
inline
getName
() const
PLMD::Action
inline
getRestart
() const
PLMD::Action
inline
getStep
() const
PLMD::Action
getStride
() const
PLMD::ActionPilot
getTime
() const
PLMD::Action
getTimeStep
() const
PLMD::Action
getUnits
() const
PLMD::Action
protected
isActive
() const
PLMD::Action
inline
isOptionOn
(const std::string &s) const
PLMD::Action
inline
keywords
PLMD::Action
label
PLMD::Action
private
line
PLMD::Action
private
lockRequests
()
PLMD::Action
inline
virtual
log
PLMD::Action
multi_sim_comm
PLMD::Action
name
PLMD::Action
private
never_activate
PLMD::Action
private
onStep
() const
PLMD::ActionPilot
virtual
operator=
(const Action &a)=delete
PLMD::Action
private
options
PLMD::Action
private
parse
(const std::string &key, T &t)
PLMD::Action
parseFlag
(const std::string &key, bool &t)
PLMD::Action
parseNumbered
(const std::string &key, const int no, T &t)
PLMD::Action
parseNumberedVector
(const std::string &key, const int no, std::vector< T > &t)
PLMD::Action
parseVector
(const std::string &key, std::vector< T > &t)
PLMD::Action
plumed
PLMD::Action
prepare
()
PLMD::Action
virtual
readAtomsFromPDB
(const PDB &)
PLMD::Action
inline
virtual
registerKeywords
(Keywords &keys)
PLMD::ActionPilot
static
replica_index
PLMD::Action
private
resetStoredTimestep
()
PLMD::Action
restart
PLMD::Action
private
runFinalJobs
()
PLMD::Action
inline
virtual
setOption
(const std::string &s)
PLMD::Action
virtual
setStride
(const int &n)
PLMD::ActionPilot
setupConstantValues
(const bool &have_atoms)
PLMD::Action
stride
PLMD::ActionPilot
private
timestep
PLMD::Action
private
unlockRequests
()
PLMD::Action
inline
virtual
update
()
PLMD::Action
inline
virtual
update_from
PLMD::Action
private
update_until
PLMD::Action
private
usingNaturalUnits
() const
PLMD::Action
protected
warning
(const std::string &msg)
PLMD::Action
writeInGraph
() const
PLMD::Action
virtual
~Action
()
PLMD::Action
virtual
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1.8.17