LCOV - code coverage report
Current view: top level - generic - Flush.cpp (source / functions) Hit Total Coverage
Test: plumed test coverage Lines: 22 22 100.0 %
Date: 2020-11-18 11:20:57 Functions: 11 12 91.7 %

          Line data    Source code
       1             : /* +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
       2             :    Copyright (c) 2011-2019 The plumed team
       3             :    (see the PEOPLE file at the root of the distribution for a list of names)
       4             : 
       5             :    See http://www.plumed.org for more information.
       6             : 
       7             :    This file is part of plumed, version 2.
       8             : 
       9             :    plumed is free software: you can redistribute it and/or modify
      10             :    it under the terms of the GNU Lesser General Public License as published by
      11             :    the Free Software Foundation, either version 3 of the License, or
      12             :    (at your option) any later version.
      13             : 
      14             :    plumed is distributed in the hope that it will be useful,
      15             :    but WITHOUT ANY WARRANTY; without even the implied warranty of
      16             :    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
      17             :    GNU Lesser General Public License for more details.
      18             : 
      19             :    You should have received a copy of the GNU Lesser General Public License
      20             :    along with plumed.  If not, see <http://www.gnu.org/licenses/>.
      21             : +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ */
      22             : #include "core/ActionRegister.h"
      23             : #include "core/ActionPilot.h"
      24             : #include "core/PlumedMain.h"
      25             : #include "core/ActionSet.h"
      26             : 
      27             : namespace PLMD {
      28             : namespace generic {
      29             : 
      30             : using namespace std;
      31             : 
      32             : //+PLUMEDOC GENERIC FLUSH
      33             : /*
      34             : This command instructs plumed to flush all the open files with a user specified frequency.
      35             : Notice that all files are flushed anyway every 10000 steps.
      36             : 
      37             : This
      38             : is useful for preventing data loss that would otherwise arrise as a consequence of the code
      39             : storing data for printing in the buffers. Notice that wherever it is written in the
      40             : plumed input file, it will flush all the open files.
      41             : 
      42             : \par Examples
      43             : 
      44             : A command like this in the input will instruct plumed to flush all the output files every 100 steps
      45             : \plumedfile
      46             : d1: DISTANCE ATOMS=1,10
      47             : PRINT ARG=d1 STRIDE=5 FILE=colvar1
      48             : 
      49             : FLUSH STRIDE=100
      50             : 
      51             : d2: DISTANCE ATOMS=2,11
      52             : # also this print is flushed every 100 steps:
      53             : PRINT ARG=d2 STRIDE=10 FILE=colvar2
      54             : \endplumedfile
      55             : (see also \ref DISTANCE and \ref PRINT).
      56             : */
      57             : //+ENDPLUMEDOC
      58             : 
      59          32 : class Flush:
      60             :   public ActionPilot
      61             : {
      62             : public:
      63          16 :   explicit Flush(const ActionOptions&ao):
      64             :     Action(ao),
      65          16 :     ActionPilot(ao)
      66             :   {
      67          16 :     checkRead();
      68          16 :   }
      69             :   static void registerKeywords( Keywords& keys );
      70         453 :   void calculate() {}
      71         453 :   void apply() {}
      72         453 :   void update() {
      73         453 :     plumed.fflush();
      74         453 :     log.flush();
      75         453 :     const ActionSet & actionSet(plumed.getActionSet());
      76        1888 :     for(const auto & p : actionSet)
      77        1435 :       p->fflush();
      78         453 :   }
      79             : };
      80             : 
      81        6468 : PLUMED_REGISTER_ACTION(Flush,"FLUSH")
      82             : 
      83          17 : void Flush::registerKeywords( Keywords& keys ) {
      84          17 :   Action::registerKeywords( keys );
      85          17 :   ActionPilot::registerKeywords( keys );
      86          68 :   keys.add("compulsory","STRIDE","the frequency with which all the open files should be flushed");
      87          34 :   keys.remove("LABEL");
      88          17 : }
      89             : 
      90             : }
      91        4839 : }
      92             : 
      93             : 

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