Module: dimred
| Description | Usage |
|---|---|
| Information about the module | |
| Authors: authors |   |
Details
Actions
The following actions are part of this module
| Name | Description |
|---|---|
| ARRANGE_POINTS | Arrange points in a low dimensional space so that the (transformed) distances between points in the low dimensional space match the dissimilarities provided in an input matrix. |
| CLASSICAL_MDS | Create a low-dimensional projection of a trajectory using the classical multidimensional |
| PCA | Perform principal component analysis (PCA) using either the positions of the atoms a large number of collective variables as input. |
| PROJECT_POINTS | Find the projection of a point in a low dimensional space by matching the (transformed) distance between it and a series of reference configurations that were input |
| SKETCHMAP | Construct a sketch map projection of the input data |
| SKETCHMAP_PROJECTION | Read in a sketch-map projection |