Shortcut: MULTICOLVARDENS
Module | gridtools |
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Description | Usage |
Evaluate the average value of a multicolvar on a grid. | |
output value | type |
the average value of the order parameters at each point on the grid | grid |
Further details and examples
Text from manual goes here
Syntax
The following table describes the keywords and options that can be used with this action
Keyword | Type | Default | Description |
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STRIDE | compulsory | 1 | the frequency with which to accumulate the densities |
CLEAR | compulsory | 0 | the frequency with which to clear the density |
ORIGIN | compulsory | none | we will use the position of this atom as the origin |
DIR | compulsory | none | the direction in which to calculate the density profile |
KERNEL | compulsory | GAUSSIAN | the kernel function you are using |
BANDWIDTH | optional | not used | the bandwidths for kernel density esimtation |
NBINS | optional | not used | the number of bins to use in each direction (alternative to GRID_NBIN) |
GRID_MIN | optional | not used | the lower bounds for the grid (default boxlengths) |
GRID_MAX | optional | not used | the upper bounds for the grid (default boxlengths) |
DATA | optional | not used | the multicolvar which you would like to calculate the density profile for |
ATOMS | optional | not used | if you are calculating a atomic density you use this keyword to specify the atoms that are involved |
UNORMALIZED | optional | false | do not divide by the density |
NORMALIZATION | optional | not used | set true/false to determine how to the data is normalised |