- f -
- f
: PLMD::bias::Bias
, PLMD::bias::MovingRestraint
, PLMD::DataPassingObjectTyped< T >
, PLMD::molfile::md_file
- f_size
: PLMD::molfile::trx_hdr
, PLMD::xdrfile::t_trnheader
- fa
: PLMD::Brent1DRootSearch< FCLASS >
, PLMD::Minimise1DBrent< FCLASS >
- fa_max_stride_
: PLMD::bias::MetaD
- fa_min_acceleration_
: PLMD::bias::MetaD
- fa_update_frequency_
: PLMD::bias::MetaD
- fact
: PLMD::Random
- fadefact
: PLMD::mapping::PathDisplacements
- fake_der
: PLMD::F1dim< FCLASS >
- fb
: PLMD::Brent1DRootSearch< FCLASS >
, PLMD::Minimise1DBrent< FCLASS >
- fbox
: PLMD::generic::EffectiveEnergyDrift
- fc
: PLMD::Minimise1DBrent< FCLASS >
- fcp
: PLMD::Subprocess
- fermi_exp_max_
: PLMD::ves::FermiSwitchingFunction
- fermi_lambda_
: PLMD::ves::FermiSwitchingFunction
- fes_file_fmt_
: PLMD::ves::VesBias
- fes_filename_
: PLMD::ves::VesBias
- fes_fileoutput_active_
: PLMD::ves::VesBias
- fes_grid_pntr_
: PLMD::ves::LinearBasisSetExpansion
, PLMD::ves::TargetDistribution
- fes_output_active_
: PLMD::ves::Optimizer
- fes_output_stride_
: PLMD::ves::Optimizer
- fes_var_lepton_ref_
: PLMD::ves::TD_Custom
- fes_var_str_
: PLMD::ves::TD_Custom
- fesproj_fileoutput_active_
: PLMD::ves::VesBias
- fesproj_output_active_
: PLMD::ves::Optimizer
- fesproj_output_stride_
: PLMD::ves::Optimizer
- FF_rank
: PLMD::isdb::SAXS
- FF_value
: PLMD::isdb::SAXS
- FF_value_mixed
: PLMD::isdb::SAXS
- FF_value_mixed_D
: PLMD::isdb::SAXS
- FF_value_mixed_H
: PLMD::isdb::SAXS
- FF_value_solv
: PLMD::isdb::SAXS
- FF_value_solv_H
: PLMD::isdb::SAXS
- FF_value_vacuum
: PLMD::isdb::SAXS
- FF_value_vacuum_D
: PLMD::isdb::SAXS
- FF_value_vacuum_H
: PLMD::isdb::SAXS
- FFf_value
: PLMD::isdb::SAXS
- ffict
: PLMD::bias::ExtendedLagrangian
, PLMD::logmfd::LogMFD
- fib_increment
: PLMD::gridtools::GridCoordinatesObject
- fib_nlist
: PLMD::gridtools::GridCoordinatesObject
- fib_offset
: PLMD::gridtools::GridCoordinatesObject
- fib_shift
: PLMD::gridtools::GridCoordinatesObject
- fict
: PLMD::bias::ExtendedLagrangian
, PLMD::logmfd::LogMFD
- fict_ave
: PLMD::logmfd::LogMFD
- fict_max
: PLMD::logmfd::LogMFD
- fict_min
: PLMD::logmfd::LogMFD
- fictValue
: PLMD::bias::ExtendedLagrangian
, PLMD::logmfd::LogMFD
- field_iteration_
: PLMD::ves::CoeffsBase
- field_ncoeffs_total_
: PLMD::ves::CoeffsBase
- field_ndimensions_
: PLMD::ves::CoeffsBase
- field_shape_prefix_
: PLMD::ves::CoeffsBase
- field_time_
: PLMD::ves::CoeffsBase
- field_type_
: PLMD::ves::CoeffsBase
- fieldChanged
: PLMD::OFile
- fieldFmt
: PLMD::OFile
- fields
: PLMD::IFile
, PLMD::OFile
- file
: PLMD::Exception::Location
, PLMD::generic::Committor
, PLMD::generic::DumpDerivatives
, PLMD::generic::DumpForces
, PLMD::generic::DumpMassCharge
, PLMD::generic::DumpPDB
, PLMD::generic::DumpProjections
, PLMD::generic::Print
, PLMD::generic::PrintNDX
- filename
: PLMD::contour::DumpContour
, PLMD::generic::DumpVector
, PLMD::generic::Read
, PLMD::gridtools::DumpGrid
- filename_extension
: PLMD::molfile::molfile_plugin_t
- filenames
: PLMD::function::FilesHandler
- filenames_have_iteration_number_
: PLMD::ves::VesBias
- files
: PLMD::Action
, PLMD::PlumedMain
- finalize
: plumed_plumedmain_function_holder_x
- first
: PLMD::generic::DumpMassCharge
, PLMD::generic::Plumed
, PLMD::vatom::Center
- first_bias_
: PLMD::isdb::Rescale
- first_status_
: PLMD::isdb::EMMI
- first_step_
: PLMD::maze::Optimizer
- first_time_
: PLMD::isdb::EMMI
, PLMD::isdb::Shadow
, PLMD::maze::Optimizer
- first_time_w_
: PLMD::isdb::EMMI
- firstPosClose
: PLMD::colvar::PathMSDBase
- firststep
: PLMD::ActionForInterface
, PLMD::ActionWithValue
, PLMD::colvar::RMSDVector
, PLMD::function::FunctionOfMatrix< T >
, PLMD::function::FunctionOfScalar< T >
, PLMD::function::FunctionOfVector< T >
, PLMD::gridtools::ActionWithGrid
- firstStepFlag
: PLMD::sasa::SASA_HASEL
, PLMD::sasa::SASA_LCPO
- firsttime
: PLMD::bias::ExtendedLagrangian
, PLMD::colvar::CoordinationBase
, PLMD::fourier::FourierTransform
- firstTime
: PLMD::isdb::Metainference
, PLMD::isdb::MetainferenceBase
- firsttime
: PLMD::logmfd::LogMFD
, PLMD::s2cm::S2ContactModel
- firstTimeW
: PLMD::isdb::Metainference
, PLMD::isdb::MetainferenceBase
- fixed
: PLMD::ActionToPutData
- fixed_sigma_
: PLMD::opes::OPESmetad< mode >
- fixed_stepsize_
: PLMD::ves::Optimizer
- fixed_width
: PLMD::gridtools::KDE
- flags
: PLMD::PDB
, PLMD::TypesafePtr
, plumed_safeptr
, plumed_safeptr_x
- flexbin_
: PLMD::bias::MetaD
, PLMD::bias::PBMetaD
- flog
: PLMD::logmfd::LogMFD
- flying_
: PLMD::bias::MetaD
- fmass
: PLMD::piv::PIV
- fmin
: PLMD::Minimise1DBrent< FCLASS >
- fmt
: PLMD::bias::MaxEnt
, PLMD::contour::DumpContour
, PLMD::function::FuncSumHills
, PLMD::generic::Committor
, PLMD::generic::DumpDerivatives
, PLMD::generic::DumpForces
, PLMD::generic::DumpPDB
, PLMD::generic::DumpProjections
, PLMD::generic::DumpVector
, PLMD::generic::EffectiveEnergyDrift
, PLMD::generic::Print
, PLMD::gridtools::DumpGrid
, PLMD::molfile::md_file
- fmt_
: PLMD::bias::MetaD
, PLMD::bias::PBMetaD
, PLMD::eds::EDS
, PLMD::fisst::FISST
, PLMD::GridBase
- fmt_gro_box
: PLMD::generic::DumpAtoms
- fmt_gro_pos
: PLMD::generic::DumpAtoms
- fmt_xyz
: PLMD::generic::DumpAtoms
- force_
: PLMD::maze::OptimizerBias
- force_normalization_
: PLMD::ves::TargetDistribution
- force_weight_
: PLMD::fisst::FISST
- forced_unique
: PLMD::DomainDecomposition
- forceOnEnergy
: PLMD::ActionAtomistic
- forceOnExtraCV
: PLMD::ActionAtomistic
- forces
: PLMD::ActionAtomistic
, PLMD::bias::Bias
, PLMD::generic::EffectiveEnergyDrift
, PLMD::generic::Plumed
, PLMD::isdb::EMMI
, PLMD::isdb::MetainferenceBase
- forces_
: PLMD::fisst::FISST
- forces_to_scale
: PLMD::colvar::Energy
- forcesForApply
: PLMD::ActionWithValue
- forcesToApply
: PLMD::clusters::ClusterWeights
, PLMD::contour::DistanceFromContourBase
, PLMD::isdb::EMMI
, PLMD::isdb::MetainferenceBase
- foreignDeltaBias
: PLMD::GREX
- fourier_params
: PLMD::fourier::FourierTransform
- fp
: PLMD::FileBase
, PLMD::xdrfile::XDRFILE
- fpc
: PLMD::Subprocess
- fpcp
: PLMD::Subprocess
- fppc
: PLMD::Subprocess
- fractional
: PLMD::vatom::ArgsToVatom
- freq_adaptive_
: PLMD::bias::MetaD
- friction
: PLMD::bias::ExtendedLagrangian
- from_domains
: PLMD::ActionToPutData
- ftilde_
: PLMD::isdb::Metainference
, PLMD::isdb::MetainferenceBase
- full
: PLMD::metatensor::vesin::VesinOptions
- fullatomlist_
: PLMD::NeighborList
- fullList
: PLMD::DomainDecomposition
- fullPath
: PLMD::ActionOptions
, PLMD::RegisterBase< Content >::ContentAndFullPath
- func
: PLMD::F1dim< FCLASS >
, PLMD::function::Custom
- funcname
: PLMD::GridBase
- function
: PLMD::contour::ContourFindingBase
, PLMD::function::Custom
, PLMD::gridtools::FindGridOptimum
, PLMD::lepton::Operation
, PLMD::matrixtools::OuterProduct
, PLMD::SwitchingFunction
- functions
: PLMD::symfunc::ThreeBodyGFunctions
, plumed_symbol_table_type_x
- funit
: PLMD::ActionToPutData
, PLMD::DataPassingObject
- Fvol
: PLMD::piv::PIV